Primer Design


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RAPD Primer Design from Metagenomes  v.1.0

RAPD Primer Design from Metagenomes (RPD-M) scans metagenome sequences identifying and determining relative frequency of candidate primers for Random Amplification of Polymorphic DNA (RAPD) assays.

ORFprimer - primer design for ORFs  v.1.0

ORFer reads the NCBI GenBank XML sequence format and extracts open reading frames for proteins.





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JCVI Primer Designer  v.20101122

This is the high throughput PCR primer design software that is used at the J.

PerlPrimer  v.1. 1. 2020

PerlPrimer is a free, open-source GUI application written in Perl that designs primers for standard PCR, bisulphite PCR, real-time PCR (QPCR) and sequencing. It aims to automate and simplify the process of primer design.

SeqState  v.1.4.1

Analyze fasta file with this application. SeqState offer you a primer design, sequence statistics, and indel coding according to various schemes.Requirements: *

Sequence Analysis  v.1.6

Sequence editing, reverse complement, protein translation, ORF finding, secondary structure, composition, isoelectric point, primer design, pairwise comparison, publish layout, sequence reformatting.

Intron marker pipeline  v.1.0

IMP is an automated tool for intron-flanking primer design based off of Expressed Sequence Tags (ESTs).

Beacon Designer  v.7 91

Beacon Designer™ automates the design of real time primers and probes. It is used by molecular biologists worldwide to design successful real time PCR assays. It saves the time and the money involved in failed experiments.

Gene Designer  v.2.0.162

Gene Designer encompasses a complete and visually rich set of tools to bring your creative ideas to completion.

MB DNA Analysis  v.6.84

MB is a FREE software for DNA analysis. MB stands for MolecularBiological DNA Analysis. MB is a free Windows DNA analysis program. On other systems (Linux, Macintosh) it is possible to emulate the program.

OSLay  v.1.0

Sequence matching made easy. OSLay use synteny between matching sequences in a target assembly and a reference assembly to layout the contigs (or scaffolds) in the target assembly. The tool provides an interactive visualization of the computed layout

Color Picker for Logo Design

Software for logo designers. Easily pick needed color from the screen. Useful when you design logos. Select needed color from the logo design color combination. Pick colors from existing logos.

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